Special Issue
RNA & Gene Regulation
Guest editors: Brenton Graveley and Mihaela Zavolan

Special Issue
Plant Epigenomics
Guest editors: Nathan Springer and Claudia Köhler

Thematic Series
Cancer Genomics

Thematic Series
Epigenomics of Disease

Thematic Series
Microbiomes and Metagenomics

Special Issue
The Biology of Human Diseases, as Revealed Through Genomics
Guest Editors: Mark McCarthy and Daniel MacArthur

Special Issue
Single-Cell Omics
Guest Editors: Sarah Teichmann and Sten Linnarsson

Special Issue
Genome editing
Guest Editors: Jennifer Doudna and Charles Gersbach

Special Issue
The three dimensional organization of the nucleus
Guest Editors: Peter Fraser and David Gilbert

Cross-journal Collection
Avian genomes

Cross-journal Special Issue
Genomics of infectious diseases
Guest Editors: George Weinstock and Sharon Peacock

Special Issue
Genomics of cancer progression and heterogeneity
Guest Editors: Elaine R Mardis and Samuel Aparicio

Special Issue
RNA binding proteins and their recognition elements within the transcriptome
Guest Editors: John Rinn and Jernej Ule

Special Issue
Plant genomics
Guest Editors: Mario Caccamo and Erich Grotewold

Special Issue
Epigenomics
Guest Editor: Alexander Meissner

Cross-journal Collection
The ENCODE project

Special Issue
Exome sequencing
Guest Editor: Jay Shendure

Cross-journal Collection
The tammar wallaby genome and transcriptome

Cross-journal Collection
Cloud computing tools and analyses

Special Collection
 10th Anniversary 

Cross-journal Collection
Bovine: the companion papers for the publication of the bovine genome sequence

Cross-journal Collection
FANTOM 4

Cross-journal Collection
Daphnia: the companion papers for the genome sequence

Special Collection
BioSapiens

Thematic Series
Ontologies

Special Collection
Release 3 of the Drosophila genome