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Featured article: Chromatin spatial organization of wild type and mutant peanuts reveals high-resolution genomic architecture and interaction alterations

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Wheat in vivo RNA structure landscape reveals a prevalent role of RNA structure in modulating translational subgenome expression asymmetry

Authors: Xiaofei Yang, Haopeng Yu, Wenqing Sun, Ling Ding, Ji Li, Jitender Cheema, Ricardo Ramirez-Gonzalez, Xuebo Zhao, Azahara C. Martín, Fei Lu, Bao Liu, Cristobal Uauy, Yiliang Ding and Huakun Zhang

Content type: Research

30 November 2021
treekoR: identifying cellular-to-phenotype associations by elucidating hierarchical relationships in high-dimensional cytometry data

Authors: Adam Chan, Wei Jiang, Emily Blyth, Jean Yang and Ellis Patrick

Content type: Method

29 November 2021
recount3: summaries and queries for large-scale RNA-seq expression and splicing

Authors: Christopher Wilks, Shijie C. Zheng, Feng Yong Chen, Rone Charles, Brad Solomon, Jonathan P. Ling, Eddie Luidy Imada, David Zhang, Lance Joseph, Jeffrey T. Leek, Andrew E. Jaffe, Abhinav Nellore, Leonardo Collado-Torres, Kasper D. Hansen and Ben Langmead

Content type: Database

29 November 2021
Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing

Authors: Weipeng Mo, Bo Liu, Hong Zhang, Xianhao Jin, Dongdong Lu, Yiming Yu, Yuelin Liu, Jinbu Jia, Yanping Long, Xian Deng, Xiaofeng Cao, Hongwei Guo and Jixian Zhai

Content type: Research

25 November 2021
Roadblock: improved annotations do not necessarily translate into new functional insights

Authors: Nicola A. L. Hall, Becky C. Carlyle, Wilfried Haerty and Elizabeth M. Tunbridge

Content type: Editorial

22 November 2021

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The Kardashian index: a measure of discrepant social media profile for scientists

Authors: Neil Hall

Content type: Comment

30 July 2014
A survey of best practices for RNA-seq data analysis

Authors: Ana Conesa, Pedro Madrigal, Sonia Tarazona, David Gomez-Cabrero, Alejandra Cervera, Andrew McPherson, Michał Wojciech Szcześniak, Daniel J. Gaffney, Laura L. Elo, Xuegong Zhang and Ali Mortazavi

Content type: Review

26 January 2016

The Erratum to this article has been published in Genome Biology 2016 17:181
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

Authors: Jo Vandesompele, Katleen De Preter, Filip Pattyn, Bruce Poppe, Nadine Van Roy, Anne De Paepe and Frank Speleman

Content type: Research

18 June 2002
Differential expression analysis for sequence count data

Authors: Simon Anders and Wolfgang Huber

Content type: Method

27 October 2010
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Authors: Michael I Love, Wolfgang Huber and Simon Anders

Content type: METHOD

5 December 2014

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Reviewer Acknowledgements 2020

The Editors and staff of Genome Biology would like to warmly thank the Reviewers whose comments helped to shape the journal, for their invaluable assistance with review of manuscripts in 2020.

Genome Biology

Special Issue: Long Read Sequencing

Featured article: Chromatin spatial organization of wild type and mutant peanuts reveals high-resolution genomic architecture and interaction alterations

Articles

Wheat in vivo RNA structure landscape reveals a prevalent role of RNA structure in modulating translational subgenome expression asymmetry

treekoR: identifying cellular-to-phenotype associations by elucidating hierarchical relationships in high-dimensional cytometry data

recount3: summaries and queries for large-scale RNA-seq expression and splicing

Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing

Roadblock: improved annotations do not necessarily translate into new functional insights

The Kardashian index: a measure of discrepant social media profile for scientists

A survey of best practices for RNA-seq data analysis

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

Differential expression analysis for sequence count data

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Latest articles from Genome Medicine

Genomic medicine in the Middle East

Genome-wide identification and characterization of circular RNA m6A modification in pancreatic cancer

Evaluating the potential for respiratory metagenomics to improve treatment of secondary infection and detection of nosocomial transmission on expanded COVID-19 intensive care units

Focus: Fertility

Reviews, Research highlights and commentaries

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From the blog

Exploring the history of smallpox vaccination with 19th Century American vaccination kits

Transposon Day Quiz 2020

DNA Day quiz 2020

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