Genome Biology

Article collection: Arthropod genomics

A cauliflower structure in dental plaque. From Fig 8 Welch et al. PNAS U S A. 2016;113(6):E791-800.

Courtesy of Gary Borisy and reprinted with permission from PNAS.

Article collection: Microbiome biology

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Content type: Research
| 24 June 2019

Performance of neural network basecalling tools for Oxford Nanopore sequencing

Authors: Ryan R. Wick, Louise M. Judd and Kathryn E. Holt
Content type: Research
| 21 June 2019

Trapping a somatic endogenous retrovirus into a germline piRNA cluster immunizes the germline against further invasion

Authors: Céline Duc, Marianne Yoth, Silke Jensen, Nolwenn Mouniée, Casey M. Bergman, Chantal Vaury and Emilie Brasset
Content type: Research
| 21 June 2019

Ancient polymorphisms contribute to genome-wide variation by long-term balancing selection and divergent sorting in Boechera stricta

Authors: Baosheng Wang, Julius P. Mojica, Nadeesha Perera, Cheng-Ruei Lee, John T. Lovell, Aditi Sharma, Catherine Adam, Anna Lipzen, Kerrie Barry, Daniel S. Rokhsar, Jeremy Schmutz and Thomas Mitchell-Olds
Content type: Review
| 20 June 2019

Essential guidelines for computational method benchmarking

Authors: Lukas M. Weber, Wouter Saelens, Robrecht Cannoodt, Charlotte Soneson, Alexander Hapfelmeier, Paul P. Gardner, Anne-Laure Boulesteix, Yvan Saeys and Mark D. Robinson
Content type: Research
| 17 June 2019

Cold stress induces enhanced chromatin accessibility and bivalent histone modifications H3K4me3 and H3K27me3 of active genes in potato

Authors: Zixian Zeng, Wenli Zhang, Alexandre P. Marand, Bo Zhu, C. Robin Buell and Jiming Jiang

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Content type: Comment
| 30 July 2014

The Kardashian index: a measure of discrepant social media profile for scientists

Authors: Neil Hall
Content type: Review
| 26 January 2016

A survey of best practices for RNA-seq data analysis

Authors: Ana Conesa, Pedro Madrigal, Sonia Tarazona, David Gomez-Cabrero, Alejandra Cervera, Andrew McPherson, Michał Wojciech Szcześniak, Daniel J. Gaffney, Laura L. Elo, Xuegong Zhang and Ali Mortazavi

The Erratum to this article has been published in Genome Biology 2016 17:181
Content type: Method
| 27 October 2010

Differential expression analysis for sequence count data

Authors: Simon Anders and Wolfgang Huber
Content type: METHOD
| 5 December 2014

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Authors: Michael I Love, Wolfgang Huber and Simon Anders
Content type: Research
| 10 December 2013

DNA methylation age of human tissues and cell types

Authors: Steve Horvath

The Erratum to this article has been published in Genome Biology 2015 16:96

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Article collection: Arthropod genomics

Article collection: Microbiome biology

Articles

Performance of neural network basecalling tools for Oxford Nanopore sequencing

Trapping a somatic endogenous retrovirus into a germline piRNA cluster immunizes the germline against further invasion

Ancient polymorphisms contribute to genome-wide variation by long-term balancing selection and divergent sorting in Boechera stricta

Essential guidelines for computational method benchmarking

Cold stress induces enhanced chromatin accessibility and bivalent histone modifications H3K4me3 and H3K27me3 of active genes in potato

The Kardashian index: a measure of discrepant social media profile for scientists

A survey of best practices for RNA-seq data analysis

Differential expression analysis for sequence count data

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

DNA methylation age of human tissues and cell types

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The fascination of plant genomes

Genome Biology at Genome Informatics

Bigger CRISPR- Cas12a toolbox, wider genomic coverage and higher targeting efficiencies

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