Table 1 Unique type I PAM sequences. Table of all unique type I PAMs found for the different subtypes and representative genera that contain the repeat cluster for which each PAM was determined. For previously described PAMs, a reference ID has been added which correspond to the following: 1 [60], 2 [61], 3 [62], 4 [63], 5 [45], 6 [64], 7 [65], 8 [46], 9 [14], 10 [66], 11 [67], 12 [49], 13 [68], 14 [69], and 15 [70]
Type | PAM | Genus | Ref |
|---|---|---|---|
I-A | ATG | Leptospira | 1 |
CCN | Acidianus | 2 | |
TTA | Thermodesulfobacterium | ||
TCN | Sulfurisphaera | 3 | |
ATN | Aminobacterium | ||
I-B | CCA | Moorella | 4 |
CCN | Clostridium | 4 | |
CCT | Ureibacillus | 4 | |
TAC | Halorubrum | ||
TCA | Campylobacter | ||
TCN | Campylobacter | ||
TTA | Methanosarcina | 5 | |
TTC | Halobacterium | 6 | |
TTN | Novibacillus | 7 | |
TTTA | Petrimonas | ||
TTG | Thermobacillus | ||
I-C | CTN | Anaerobutyricum | |
CCN | Porphyromonas | ||
CTT | Ruminococcus | ||
TTC | Geobacillus | 8 | |
TTN | Acidovorax | ||
TTT | Lachnoclostridium | ||
I-D | GCN | Haloquadratum | |
GGTG | Halorubrum | ||
GTN | Methanotrix | 9 | |
GTT | Microcystis | ||
GTG | Methanospirillum | 10 | |
I-E | AAC | Bifidobacterium | 11 |
AAG | Geobacter | 12 | |
AAN | Klebsiella | ||
AAT | Lactobacillus | ||
AAA | Kosakonia | 13 | |
AC | Corynebacterium | ||
AG | Xenorhabdus | ||
AWG | Escherichia | ||
I-F | ACC | Aeromonas | |
CC | Pseudomonas | 14 | |
CCA | Pseudomonas | ||
I-G | TAC | Rothia | |
TAN | Propionibacterium | 11 | |
TTN | Pseudopropionibacterium | 15 | |
AAN | Acidipropionibacterium | ||
TTC | Rhodothermus |