Fig. 2
From: Tissue-specific usage of transposable element-derived promoters in mouse development
Genes with accessible transposable elements (TEs)-derived TSS in five mouse tissues. a Distribution of accessible TEs in the gene’s promoter and TEs-derived TSS in five tissues. Near 10% of accessible TEs located in promoter regions, and 1% accessible TEs contained gene TSS. b Gene-type distribution of 453 accessible TE-derived TSSs identified in five mouse tissues, including 117 protein-coding genes and 144 lincRNA. c Tissue-specific distribution of 453 accessible TE-derived TSSs. A total of 263 of these accessible TEs can be validated by CAGE-seq. The annotation colors represented different gene types. Near half of TE-derived TSSs were only identified in one tissue. d Epigenome browser view of ATAC-seq signals around the accessible TE-derived TSS of protein-coding genes (left six) and lincRNA (right six)