Table 2 Speed benchmarks for loading and visualizing Hi-C data
Tool | Loading | Visualization of | Visualization of | ||
|---|---|---|---|---|---|
user data | 1 Mb loci | 10 Mb loci | |||
Juicebox | Seconds | 1 s | 1 s | ||
Hi-Browse | NA | 10 s | 86 s | ||
my5C | NA | 1 s | 3 s | ||
3D Genome Browser | Seconds | 4 s | 11 s | ||
Epigenome Browser | Seconds | 33 s | 73 s |