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Figure 1 | Genome Biology

Figure 1

From: Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica

Figure 1

Population structure in O. sativa . A principal component analysis (PCA) based on 40,000 SNPs shows the deep subpopulation structure of a rice diversity panel (400 O. sativa accessions). The top two principal components (PC1 and PC2) explain 44.1% of the genetic variation. Accessions are color-coded based on subpopulation: red, indica; dark blue, temperate japonica; light blue, tropical japonica; yellow, aus; purple, aromatic; black, admixed. Figure reproduced with permission from [7].

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Genome Biology

ISSN: 1474-760X

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