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Table 4 Functional annotation of the predicted proteome from the N.

From: Reference genomes and transcriptomes of Nicotiana sylvestris and Nicotiana tomentosiformis

  N. sylvestrismerged N. tomentosiformismerged
Unique IDs 38,940 38,648
EC numbers   
    Any EC assignment 12,220 11,951
    3×EC assignments 7,793 7,611
    ... to unique proteins 7,554 7,397
    3×EC assignments HC 4,117 4,069
    ...to unique proteins 4,061 4,008
    Unique 3×EC numbers 148 150
    4×EC assignments 4,427 4,340
    ...to unique proteins 4,203 4,120
    4×EC assignments HC 3,096 3,120
    ...to unique proteins 2,989 3,007
    Unique 4×EC 635 635
GO terms   
    Unique protein IDs 22,497 22,196
    Unique protein IDs with a molecular function 19,852 19,551
    Biological process 48,896 48,365
    Molecular function 24,680 24,136
    Cellular component 8,414 8,419
  1. sylvestris and N. tomentosiformis assemblies
  2. EFICAz2.5 was used to assign Enzyme Commission (EC) numbers and InterProScan was used to assign GO terms assignments to the ORFs derived from the assemblies. HC, high confidence.