Fig. 1
From: Evaluating and improving the representation of bacterial contents in long-read metagenome assemblies
Showcases of when the circle rescue works well and not well. A The top row shows visualization of three subgraphs from hifiasm-meta primary assemblies, with contigs colored randomly [19]. The bottom row shows the circles (i.e., putative MAGs) rescued by the heuristics, with contigs of each circle colored the same. Contigs that do not belong to any rescued circle are colored gray. These circles were near-complete MAGs based on CheckM1. B The heuristics does not work well in subgraphs or regions like this one. In this particular example, the contigs had very low coverages