From: scAbsolute: measuring single-cell ploidy and replication status
Sample | Ploidy | N | HMMCopy | Ginkgo | CHISEL | scAbsolute |
---|---|---|---|---|---|---|
 |  |  | % outlier (mean distance) | |||
BT-20 | 2.70 | 1228 | 13.4 (0.51) | 1.1 (0.28) | 8.1 (0.14) | 0.5 (0.14) |
MB-157 | 2.55 | 1210 | 31.2 (0.91) | 0.5 (0.18) | 2.1 (0.16) | 0.8 (0.13) |
MB-231 | 2.41 | 897 | 34.4 (0.92) | 7.1 (0.36) | 0.1 (0.14) | 0.7 (0.05) |
MB-453 | 4.17 | 1260 | 8.1 (0.26) | 65.6 (1.06) | 42.6 (0.98) | 11.3 (0.33) |
TN1 | 3.45 | 1100 | 1.7 (0.22) | 1.8 (0.18) | 5.7 (0.21) | 0.8 (0.08) |
TN2 | 3.03 | 1024 | 3.8 (0.24) | 0.8 (0.15) | 2.6 (0.20) | 1.1 (0.10) |
TN3 | 3.44 | 1101 | 27.2 (0.92) | 2.4 (0.20) | 3.2 (0.11) | 4.5 (0.16) |
TN4 | 3.76 | 1307 | 19.8 (0.59) | 53.9 (1.18) | 47.0 (0.91) | 16.6 (0.40) |
TN5 | 2.65 | 1238 | 40.1 (1.01) | 10.9 (0.34) | 6.2 (0.19) | 18.3 (0.50) |
TN6 | 3.17 | 1060 | 2.9 (0.33) | 58.6 (0.84) | 0.0 (0.06) | 1.5 (0.12) |
TN7 | 3.15 | 605 | 4.3 (0.30) | 49.3 (1.30) | 5.1 (0.16) | 3.8 (0.16) |
TN8 | 3.95 | 1224 | 2.4 (0.33) | 69.4 (0.88) | 6.1 (0.21) | 3.0 (0.14) |
Mean % outlier | 15.8 | 26.8 | 10.7 | 5.2 |