Table 2 Summary information of the five real datasets
Dataset | No. of cells | No. of genes | Proportion of zeros | No. of cell types | Batch information |
|---|---|---|---|---|---|
Mouse embryonic stem cells | 469 | 38,658 | 71.22% | 3 | Factorial design with balanced distribution |
Human lung cancer cells | 1402 | 12,997 | 41.16% | 3 | Factorial design from different protocols |
Mouse uterus cells | 2965 | 8994 | 91.47% | 8 | Confounding factors between batch and biology |
Mouse liver cells | 3971 | 8868 | 93.60% | 8 | Slight batch influence |
Mouse mammary gland cells | 5154 | 8254 | 93.72% | 14 | Multiple batches |