Fig. 6From: MSV: a modular structural variant caller that reveals nested and complex rearrangements by unifying breakends inferred directly from readsThe figure visualizes several ambiguities inherent to the workflow of state-of-the-art SV calling. Furthermore, it places three SV description schemes (dot-plot, VCF-format, and adjacency matrix) into their context. Additional file 10 gives examples for the four shown ambiguities (red arrows) together with additional commentsBack to article page