Fig. 3
From: Characterization of large-scale genomic differences in the first complete human genome
The syntenic comparison between different KLRC gene cluster haplotypes. a A ~ 15.4 kbp deletion in the T2T-CHM13 genome assembly results in the complete loss of KLRC2. Gene structure, duplication, and repeat annotations are shown in the miropeat diagram. b A screenshot of the KLRC2 region from the UCSC Genome Browser is shown in the top panel. The yellow box represents the ~ 15.4 kbp deleted sequence in the T2T-CHM13 genome assembly. The nuclear sequencing alignment of the breakpoints is shown in the bottom panel. Two Alu elements surrounding the breakpoints are shown in gray bars. c A ~ 15.4 kbp duplication in the HG002_hap1 genome assembly results in the complete duplication of KLRC2. Gene structure, duplication, and repeat annotations are shown in the miropeats diagram. d A screenshot of the KLRC2 region from the UCSC Genome Browser is shown in the top panel. The yellow line represents the position where the 15.4 kbp duplicated sequence is in the HG002_hap1 genome assembly. The nuclear sequencing alignment of the breakpoints is shown in the bottom panel. The disrupted Alu element within the breakpoints are shown in gray bars and a simple repeat disrupting the Alu element is shown in a brown bar