Fig. 1
From: Characterization of large-scale genomic differences in the first complete human genome
The discrepant genomic regions between GRCh38 and T2T-CHM13. a Schematic of the T2T-CHM13 assembly depicts the centromere location (purple and yellow), “non-syntenic” region (black lines and circles), and newly identified discrepant region (cyan lines and circles). Regions containing genes are represented with circles. b Pie chart of genomic structure annotations of the 590 discrepant regions. The proportion of regions in centromeres (CEN), telomeres (TEL), segdups (SD), tandem repeats (TRF), and others are shown in light purple, green, dark red, yellow, and blue. c Venn diagram shows the comparison of the discrepant regions between the previous studies [4, 9] and this study. The genome structure annotations of “non-syntenic” and newly identified regions are shown in the middle panel. The components of structural variant types of “non-syntenic” and newly identified regions are shown in the bottom panel