Fig. 6
From: Genomic and epigenomic determinants of heat stress-induced transcriptional memory in Arabidopsis
Transcriptomics cluster analysis, baseline expression and overlay with ChIP-seq clusters. a Median RNA-seq expression signal of Col-0, hsfa2, hsfa3, and hsfa2 hsfa3 double mutant in 15 rclusters at the indicated time points. tpm, transcripts per million; n, number of genes per cluster. b Heat map illustrating the overlap of genes in rclusters and cclusters. Colors indicate the fraction of genes in rclusters found in ccluster. Numbers in brackets after cluster number indicate the total number of elements in the respective cluster. *p < 0.05 Fisher’s exact test. c Violin plot representing the basal expression level (at NHS condition) of each rcluster. Rclusters r2, r8, r11, and r14 show low basal expression