Fig. 5
From: Genomic and epigenomic determinants of heat stress-induced transcriptional memory in Arabidopsis
Sequence motifs underlying ChIP-seq peaks. a De novo motif analysis was performed with HOMER on clusters c7, c11, c12, and c14. The fraction of peaks with the indicated motif is shown for each ccluster. Motifs are sorted according to increasing p-value (cf. Additional File 4: Supplementary Data 3). The most highly enriched motif contains the core motif AGAAnnTCTT consisting of two conserved HSE elements [46]. b Transcription factor binding motif analysis was performed with HOMER on clusters c7, c11, c12, and c14. The fraction of peaks with the indicated motif is shown for each ccluster. Motifs are sorted according to increasing p-value (cf. Additional File 4: Supplementary Data 3). The first 16 motifs contain variations of HSE elements