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Fig. 2 | Genome Biology

Fig. 2

From: Decoding enhancer complexity with machine learning and high-throughput discovery

Fig. 2

Mechanisms of enhancer action. Enhancer action on target promoters can occur via looping that enables physical contact in either a stable or dynamic manner in agreement with the evidence of proximity from chromatin conformation experiments and DNA FISH [39]. Alternative mechanism of action include the phase separation of enhancers, promoters, and associated proteins into condensates which can provide the proximity required for enhancer-promoter contact without looping [49, 50]; the diffusion of factors from enhancers to promoters, such as acetylated TFs [51], forming a chemical gradient that enables specific targeting of promoters within close proximity without direct enhancer-promoter contact; and a role for eRNAs by triggering pause release of RNA Pol II at target promoters [54]

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