Skip to main content
Fig. 5 | Genome Biology

Fig. 5

From: Evolutionary dynamics of pseudoautosomal region 1 in humans and great apes

Fig. 5

A Sex-averaged recombination rates for 10 kb windows of PAR1 in humans (HUM) and eight subspecies of great apes (PTE = P. troglodytes ellioti; PTS = P. troglodytes schweinfurthii; PTT = P. troglodytes troglodytes; PTV = P. troglodytes verus; PPA = P. paniscus; GGG = G. gorilla gorilla; PAB = P. abelii; PPY = P. pygmaeus). Numbers of polymorphic sites used to infer recombination maps are as follows: HUM (N = 220), PTE (N = 4039), PTS (N = 5191), PTT (N = 6765), PTV (N = 2438), PPA (N = 2064), GGG (N = 4323), PAB (N = 6957) and PPY (N = 4371). B Spearman’s coefficients for correlations between recombination maps at the 10 kb scale. C Nucleotide diversity for 10 kb windows of PAR1 in humans and great apes, measured as 𝜋 and Watterson’s 𝜃. Numbers of polymorphic sites used to infer diversity statistics as follows: HUM (N = 29,172), PTE (N = 5192), PTS (N = 6161), PTT (N = 9379), PTV (N = 3181), PPA (N = 2687), GGG (N = 4876), PAB (N = 7606) and PPY (N = 4547). D Spearman’s coefficients for correlations between nucleotide diversity 𝜋 at the 10 kb scale. Crossed-out coefficients are non-significant (p > 0.05). We only consider 10 kb regions with more than 2500 callable sites

Back to article page