Fig. 2
From: Enhanced protein isoform characterization through long-read proteogenomics
Long-read proteogenomic approach for enhanced sample-specific protein identification. Schematic of the long-read proteogenomics pipeline for improved protein isoform characterization. The pipeline includes approaches for ORF calling from long transcript reads, an automated protein isoform classification (SQANTI Protein), novel protein isoform detection, and a long-read-informed protein inference algorithm. CPM—full-length read counts per million