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Fig. 3 | Genome Biology

Fig. 3

From: Benchmarking clustering algorithms on estimating the number of cell types from single-cell RNA-sequencing data

Fig. 3

Impact of number of cells on the performance of number of cell type estimation. a Density plot summarising overall deviation in number of cell type estimation across all number of cell types (i.e. 5, 10, 15, and 20) with different number of cells in each cell type. b Concordance of clustering output and pre-defined cell type labels quantified by four concordance measures for datasets with different number of cells in each cell type (i.e. 50, 100, 150, 200, and 250). Each dot represents the mean value of concordance score

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Genome Biology

ISSN: 1474-760X

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