Fig. 5
From: IDEAS: individual level differential expression analysis for single-cell RNA-seq data
A Fisher’s exact test p-values to assess whether autism related genes (SFARI genes) have significant overlap with differential expressed genes (nominal p-values <0.05). B, C Odds ratios and their 95% confidence intervals derived from Fisher’s exact test in A for two cell types: layer 2/3 excitatory neurons (L2_3) and vasoactive intestinal polypeptide (VIP)–expressing interneurons (IN-VIP). D, E Estimates of the proportion of DE genes among those SFARI genes or non-SFARI genes for two cell types: L2_3 and IN-VIP. F Pathways that are over-represented by the genes that are differentially expressed between autism subjects and controls in microglia