From: Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel
Line id | Number of contigs | GC (%) | Total length | Largest contig | N50 | Total aligned length | Largest alignment | NA50 |
---|---|---|---|---|---|---|---|---|
4-1 | 2,886 | 40.66 | 730,816,425 | 5,635,124 | 802,725 | 599,170,757 | 2,340,443 | 259,311 |
4-2 | 2,762 | 40.71 | 737,637,241 | 6,376,848 | 971,613 | 612,988,975 | 2,781,976 | 279,257 |
7-1 | 2,512 | 40.69 | 732,447,291 | 5,851,261 | 942,347 | 608,014,583 | 2,243,072 | 265,102 |
7-2 | 2,892 | 40.69 | 732,448,405 | 4,099,264 | 845,096 | 607,409,964 | 1,761,859 | 253,015 |
11-1 | 3,368 | 40.56 | 728,542,858 | 4,525,370 | 624,727 | 545,652,612 | 1,541,261 | 180,262 |
69-1 | 3,077 | 40.59 | 727,390,278 | 6,080,511 | 708,738 | 573,096,833 | 1,823,612 | 220,342 |
79-2 | 3,053 | 40.62 | 730,357,166 | 6,658,276 | 742,721 | 584,535,579 | 2,384,437 | 235,007 |
80-1 | 4,374 | 40.49 | 720,948,860 | 3,238,833 | 404,886 | 491,501,885 | 1,304,457 | 105,372 |
117-2 | 2,810 | 40.73 | 732,113,747 | 5,059,334 | 903,899 | 620,809,739 | 2,195,961 | 270,130 |
131-1 | 3,651 | 40.72 | 741,963,499 | 5,589,066 | 737,055 | 563,763,739 | 2,231,101 | 180,572 |
134-1 | 3,142 | 40.71 | 731,842,804 | 4,138,056 | 747,064 | 606,908,341 | 2,042,573 | 245,116 |
134-2 | 3,977 | 40.75 | 729,131,624 | 3,835,876 | 475,444 | 621,355,180 | 1,698,873 | 209,441 |