Fig. 4
From: A deep generative model for multi-view profiling of single-cell RNA-seq and ATAC-seq data
scMVP recovers major cell types in realistic datasets. a Adjusted rand index for nine benchmark algorithms in SNARE-seq mouse P0 dataset, 10X Genomics PBMC dataset, 10X Genomics Lymph Node dataset, and SHARE-seq mouse skin dataset. b Consistency between DEGs from SNARE-seq paper and top DEGs computed from scVI and scMVP scRNA imputation. c Aggregation profile of mouse forebrain P0 H3K4me3 ChIP-seq signal (ENCSR094TTT) in gene proximal cis-regulatory peaks computed by Cicero or LASSO for raw expression or scMVP imputed expression. d Aggregation profile of mouse forebrain P0 H3K27ac ChIP-seq signal (ENCFF695KNJ) in gene distal cis-regulatory peaks computed by cicero or LASSO for raw expression or scMVP imputed expression