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Table 4 F1 score, the number of false positives (FP), and the number of false negatives (FN) obtained on GTEx skin dataset in three scenarios. Values corresponding to the best performance over all methods are italicized. All calculated performance measures are reported in Additional file 3: Table S3

From: Flimma: a federated and privacy-aware tool for differential gene expression analysis

 

F1

FP

FN

Scenario

Balanced

Mildly imbalanced

Strongly imbalanced

Balanced

Mildly imbalanced

Strongly imbalanced

Balanced

Mildly imbalanced

Strongly imbalanced

Flimma

1.00

1.00

1.00

0

0

0

0

0

0

Fisher

0.99

0.91

0.83

4

32

67

0

18

33

Stouffer

0.99

0.91

0.83

4

32

67

0

18

33

REM

0.99

0.95

0.94

4

15

21

2

14

12

RankProd

0.99

0.91

0.83

4

32

67

0

18

33