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Fig. 3 | Genome Biology

Fig. 3

From: NanoCaller for accurate detection of SNPs and indels in difficult-to-map regions from long-read sequencing by haplotype-aware deep neural networks

Fig. 3

Performances of NanoCaller and other variant callers on ten ONT datasets. SNP performance on whole-genome high-confidence intervals: a precision, b recall, c F1 score. F1 scores of SNP performances on d “all difficult-to-map” regions and e MHC. Indel performance non-homopolymer regions: f precision, g recall, h F1 score. i: F1 score of indel performance in whole-genome high-confidence intervals

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Genome Biology

ISSN: 1474-760X

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