Fig. 3
From: Sfaira accelerates data and model reuse in single cell genomics
Sfaira automatizes exploratory analysis of single-cell data. a Manual single-cell data analysis pipeline and automated sfaira pipeline. b Comparison of manual feature engineering workflow with automated embedding and cell type annotation from sfaira on a human PBMC data set. Shown are UMAPs based on a PCA of an engineered feature space and of the out-of-the-box latent space from a linear sfaira embedding model. Superimposed are cell types previously annotated for this data set and sfaira cell type predictions