Table 3 Summary of the number of independent SNPs/number of SNPs associated with the seven traits
Method | Genetic cluster | Trait | ||||||
|---|---|---|---|---|---|---|---|---|
BB | Height | DBH | FD | WD | MFA | WS | ||
CMLM | Whole pop. | 10/16 (0.68–6.70) | 0 | 2/3 (1.15–1.51) | 3/6 (2.22–5.19) | 3/3 (0.68–0.82) | 0 | 0 |
ALP | 7/12 | 0 | 0 | NA | 0 | 0 | 0 | |
CEU | 2/5 | 0 | 0 | NA | 0 | 0 | 1/2 | |
CSE | 2/4 | 0 | 0 | NA | 0 | 0 | 0 | |
NPL | 2/4 | 0 | 0 | NA | 0 | 0 | 0 | |
Rus_Bal | 0 | 0 | 0 | NA | 0 | 0 | 2/2 | |
ROM | NA | NA | NA | NA | NA | NA | NA | |
NFE | 0 | 0 | NA | NA | 0 | 0 | 0 | |
BLINK | Whole pop. | 24/24 (0.13–6.70) | 3/3 (0.33–0.48) | 2/2 (0.57–0.62) | 1/1 (5.19) | 3/3 (0.07–0.82) | 0 | 0 |
ALP | 1/1 | 0 | 0 | NA | 2/2 | 0 | 0 | |
CEU | 2/2 | 0 | 0 | NA | 0 | 0 | 1/2 | |
CSE | 2/2 | 0 | 0 | NA | 0 | 0 | 0 | |
NPL | 1/1 | 0 | 0 | NA | 0 | 0 | 0 | |
Rus_Bal | 0 | 0 | 0 | NA | 0 | 0 | 3/3 | |
ROM | NA | NA | NA | NA | NA | NA | NA | |
NFE | 6/6 | 0 | NA | NA | 0 | 1/2 | 0 | |
Total SNPs | 40/47 (0.13–6.70) | 3/3 (0.33–0.48) | 4/5 (0.57–1.51) | 3/6 (2.22–5.19) | 6/6 (0.07–0.82) | 1/2 (0.14) | 4/5 (0.06–0.21) | |
R2* | 15.7 | 1.5 | 2.6 | 4.9 | 2.4 | 0.1 | 0.5 | |
R2** | 4.7 | 1.7 | NA | NA | 0 | 0 | 0 | |