Fig. 3
![Fig. 3](http://media.springernature.com/full/springer-static/image/art%3A10.1186%2Fs13059-021-02392-1/MediaObjects/13059_2021_2392_Fig3_HTML.png)
Manhattan plots and linkage disequilibrium (LD) for loci associated with budburst stage (BB). a Two Manhattan plots showing significant association (red dots) with BB using CMLM and BLINK in the whole Swedish breeding population, and b LD between single nucleotide polymorphisms (SNPs) associated with BB in CMLM and BLINK. Blue and red horizontal lines indicate a threshold of log10(1e−05) and log10(1e−07), respectively