Fig. 11
From: nPhase: an accurate and contiguous phasing method for polyploids
Automatically cleaned predicted haplotypes for the Solanum tuberosum strain. This figure represents automatically cleaned phasing results for chromosome 2 of Solanum tuberosum. 99% of phasing predictions are contained within the 12 largest haplotigs displayed here (the 12th is so sparse it is not visualized here). The cleaned result is significantly more contiguous than the raw 1129 haplotigs obtained directly from nPhase. Only around 16% of positions are covered by more than 4 haplotigs, likely in large part where one haplotig drops off in coverage while another starts increasing