Fig. 4
From: A benchmark for RNA-seq deconvolution analysis under dynamic testing environments
Evaluation results of Sim2. a, b Heatmaps of the summarized evaluation results based on the Pearson’s correlation coefficients with a “orthog” weight matrix and b real weight matrix. In each heatmap, row indexes refer to the tested methods, and column indexes refer to the cellular component numbers. c Scatter plots of estimated weights vs. ground truths of “real” mixtures with 10 cellular components. d, e Cell type-specific evaluation results of “real” mixtures consist of 10 cellular components based on d Pearson’s correlation coefficient and e mean absolute deviance. In each heatmap, row indexes refer to the tested methods, column indexes refer to the cell types, and the last column “all” refers to the averaged evaluation results across all cell types