Table 2 Q scores and numbers of mismatch, insertion, and deletion errors of E. anophelis SUE in the isolate dataset
Methods | Avg. Q score | Median Q score | Mismatches | Insertions | Deletions |
|---|---|---|---|---|---|
Flye | 22.25 | 22.2 | 1363 | 18718 | 5039 |
Racon 4x | 23.57 | 23.57 | 1163 | 6097 | 11215 |
Racon 4x + Medaka | 26.43 | 26.48 | 566 | 1114 | 7891 |
Racon 4x + Hompolish | 33.11 | 33.57 | 1224 | 384 | 443 |
MarginPolish | 25.57 | 25.61 | 389 | 1055 | 10198 |
MarginPolish + HELEN | 23.89 | 23.91 | 669 | 4614 | 11753 |
MarginPolish + Homopolish | 35.8 | 37.21 | 447 | 222 | 435 |
Racon 4x + Medaka + Homopolish | 35.32 | 36.38 | 611 | 216 | 407 |
MarginPolish + HELEN + Homopolish | 33.57 | 34.44 | 723 | 342 | 774 |