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Table 2 Pearson correlation between the simulated and real samples’ bin means and the non-zero cell proportion of bins

From: simATAC: a single-cell ATAC-seq simulation framework

 

Correlation

Cell type

Bin mean

Non-zero cell proportion

Buenrostro2018

CMP

0.96

0.98

GMP

0.98

0.99

pDC

0.97

0.97

mono

0.92

0.94

Cusanovich2018

Heart

0.95

0.96

Kidney

0.97

0.97

LargeIntestine

0.93

0.93

Liver

0.98

0.98

PBMCs

Cell1

0.99

1

Cell3

0.99

1

Cell5

0.98

0.99

Cell7

0.99

0.99