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Table 3 Presence and distribution of CAZy modules within the MAGs and RUGs

From: 1200 high-quality metagenome-assembled genomes from the rumen of African cattle and their relevance in the context of sub-optimal feeding

CAZy module

African MAGs

Scottish RUGs

RUG 2.0

Count

%

Count

%

Count

%

GH

39,566

56.82

40,140

55.14

235,001

53.09

GT

17,473

25.09

19,722

27.09

120,494

27.22

PL

1052

1.51

1121

1.54

6834

1.54

CE

9060

13.01

9119

12.53

55,523

12.54

AA

111

0.16

154

0.21

907

0.20

CBM

2366

3.40

2545

3.50

23,928

5.41

  1. Counts of enzymes identified in each CAZyme module within the entire MAG and RUG datasets. GH glycoside hydrolase, GT glycosyl transferase, PL polysaccharide lyases, CE carbohydrate esterases, AA auxiliary activities, CBM carbohydrate binding modules
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Genome Biology

ISSN: 1474-760X

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