Table 2 Phylum-level taxonomic classification of MAGs and RUGs
Classified phyla | High-quality MAGs (1200) | Winning MAGs (850) | Scottish RUGs (850) | RUG 2.0 (4941) | ||||
|---|---|---|---|---|---|---|---|---|
No. of genomes | % | No. of genomes | % | No. of genomes | % | No. of genomes | % | |
Bacteroidetes | 385 | 32.08 | 253 | 29.76 | 288 | 33.88 | 1707 | 34.55 |
Firmicutes | 514 | 42.83 | 377 | 44.35 | 391 | 46.00 | 2407 | 48.71 |
Proteobacteria | 85 | 7.08 | 65 | 7.65 | 30 | 3.53 | 133 | 2.69 |
Fibrobacteres | 3 | 0.25 | 2 | 0.24 | 6 | 0.71 | 42 | 0.85 |
Actinobacteria | 3 | 0.25 | 2 | 0.24 | 30 | 3.53 | 164 | 3.32 |
Lentisphaerae | 76 | 6.33 | 50 | 5.88 | 8 | 0.94 | 20 | 0.40 |
Spirochaetes | 7 | 0.58 | 6 | 0.71 | 10 | 1.18 | 59 | 1.19 |
Tenericutes | 22 | 1.83 | 16 | 1.88 | 4 | 0.47 | 118 | 2.39 |
Planctomycetes | 9 | 0.75 | 5 | 0.59 | 4 | 0.47 | 12 | 0.24 |
Fusobacteria | 5 | 0.42 | 4 | 0.47 | 1 | 0.12 | 0 | 0.00 |
Verrucomicrobia | 1 | 0.08 | 1 | 0.12 | 0 | 0.00 | 47 | 0.95 |
Elusimicrobia | 16 | 1.33 | 13 | 1.53 | 8 | 0.94 | 26 | 0.53 |
Synergistetes | 1 | 0.08 | 1 | 0.12 | 0 | 0.00 | 0 | 0.00 |
Ignavibacteriae | 1 | 0.08 | 1 | 0.12 | 0 | 0.00 | 0 | 0.00 |
Euryarchaeota | 7 | 0.58 | 6 | 0.71 | 29 | 3.41 | 126 | 2.55 |
Bacteria | 65 | 5.42 | 48 | 5.65 | 41 | 4.82 | 80 | 1.62 |