From: Quantile normalization of single-cell RNA-seq read counts without unique molecular identifiers
First author | Year | Species | Tissue | Protocol | Cells | Use |
---|---|---|---|---|---|---|
Cao [17] | 2017 | C. elegans | Several | sci-RNA-seq | 32,061 | Train |
Clark [18] | 2019 | M. musculus | Retina | 10x chromium V2 | 7680 | Train |
Grun [19] | 2016 | H. sapiens | Pancreas | CEL-Seq | 1726 | Train |
Klein [20] | 2015 | M. musculus | Embryonic stem cells | inDrops | 2717 | Train |
Schiebinger [21] | 2019 | M. musculus | Induced stem cells | 10x chromium V2 | 14,925 | Train |
Zeisel [22] | 2015 | M. musculus | Brain | STRT | 3005 | Train |
Zhang [23] | 2019 | H. sapiens | Synovial/monocytes | CEL-Seq 2 | 10,001 | Train |
Macosko [24] | 2015 | M. musculus | Retina | dropseq | 7581 | Test |
Tung [25] | 2016 | H. sapiens | Induced stem cells | SMARTer | 564 | Test |
Zheng [26] | 2017 | H. sapiens | Monocytes | 10x gemcode | 2612 | Test |
Vieira Braga [27] | 2019 | H. sapiens | Lung | dropseq | 261 | DE |
Patel [28] | 2014 | H. sapiens | Glioblastoma | Smart-seq2 | 430 | Predict |
Segerstolpe [29] | 2016 | H. sapiens | Pancreas | Smart-seq2 | 1554 | Predict |