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Fig. 2 | Genome Biology

Fig. 2

From: instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder

Fig. 2

Evolution of the Ectocarpus sp. contact map, the parameters of the polymer model, and the log-likelihood of the contact map. a The raw contact map before (upper part) and after (bottom part) scaffolding using instaGRAAL. Scaffolds are ordered by size. b Evolution of three parameters of the polymer model (exponent, pre-factor, mean trans-contacts) and the log-likelihood as a function of iterations

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