Table 1 Overview of the gold standard datasets
From: Benchmarking of computational error-correction methods for next-generation sequencing data
| Â | D1 | D2 | D3 | D4 | D5 |
|---|---|---|---|---|---|
Technology | Whole genome sequencing | T cell receptor sequencing | T cell receptor sequencing | Viral sequencing | Viral sequencing |
Heterogeneity | Low | High | High | High | High |
Technique | Simulated | UMI-based error-free reads | Simulated | UMI-based error-free reads | Haplotype-based error-free reads |
Number of samples | 12 | 8 | 6 | 1 | 11 |