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Fig. 3 | Genome Biology

Fig. 3

From: scRNA-seq assessment of the human lung, spleen, and esophagus tissue stability after cold preservation

Fig. 3

Loss of data quality is associated with increased “ambient RNA” and “debris” reads in the data. a Average spread of normalized UMI counts per droplet in the spleen, which were classified into ambient RNA, debris, and cellular material. b Mean values of normalized UMI in droplets containing debris or c cellular material. Individual sample means are shown for each donor with corresponding shape; color represents tissue. Means across donors per time point are shown by filled circles; whiskers represent standard deviation. p values were gained by Student’s paired (T0 vs 72 h) and non-paired (T0 vs 24 h) t test

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Genome Biology

ISSN: 1474-760X

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