Fig. 4
From: Quantitative MNase-seq accurately maps nucleosome occupancy levels
2D occupancy plots indicate the fraction of nucleosomes obtained during the digestion from regions with different A/T content. About 700,000 nucleosomes were grouped according to their A/T content into 8 bins (0–0.5, 0.5–0.55, 0.55–0.6, 0.6–0.65, 0.65–0.7, 0.7–0.75, 0.75–0.8, 0.8–1), and for each bin, we show the distribution of fragment sizes obtained at different levels of digestion. Digestion times, from top to bottom: 1 min, 2 min, 5 min, 15 min, 40 min, 60 min. 2D occupancy plots were generated using the plot2do package available on GitHub at https://github.com/rchereji/plot2DO