Fig. 4
From: MetaCarvel: linking assembly graph motifs to biological variants
A component in the scaffold graph for the HMP stool sample. The highlighted nodes in the graph denote the path taken by MetaCarvel to generate the scaffold in this component, and the red lines denote the scaffolds generated by OPERA-LG. It can be observed that at the boundaries of the regions of variation, OPERA-LG breaks scaffolds thereby not using the information provided by the paired-end reads to generate contiguous and accurate scaffolds