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Fig. 2 | Genome Biology

Fig. 2

From: Contrasting patterns of longitudinal population dynamics and antimicrobial resistance mechanisms in two priority bacterial pathogens over 7 years in a single center

Fig. 2

K. pneumoniae isolates from CUH within the global population structure. a Phylogenetic tree reconstruction of the core gene alignment again highlights the diversity encountered in routine hospital samples. The inner ring shows mash clusters [13] which split the three species K. pneumoniae, K. quasipneumoniae, and K. variicola, at a cutoff of 0.04 correlating to an ANI of 96%. The outer ring displays which samples are derived from this study, embedded in the global diversity [7]. b Barplot illustrating the numbers of the different lineages observed in our collection compared to the global collection [7]

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Genome Biology

ISSN: 1474-760X

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