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Table 1 Wall time and memory use for individual methods applied to the simulated dataset

From: MicroPro: using metagenomic unmapped reads to provide insights into human microbiota and disease associations

  Wall time (min) MaxRSS (GB)
Reference-based 14 0.2
MicroPro (Megahit) 81 12
MicroPro (Minia 3) 43 6
De novo assembly-based (Megahit) 305 20
De novo assembly-based (Minia 3) 79 9
  1. Computing resources required for the individual methods used in the simulation study are provided. MaxRSS refers to maximum memory used by the corresponding method