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Table 2 Overview of putative mES enhancers found within CHi-C interactions called by different methods

From: ChiCMaxima: a robust and simple pipeline for detection and visualization of chromatin looping in Capture Hi-C

  Putative mES enhancers in called interaction set Total called interactions/interactions with putative enhancers
ChiCMaxima 16.8% (3235) 7.3
CHiCAGO 19.2% (3680) 25.6
GOTHiC 71.4% (13711) 40.0
ChiCMaxima + CHiCAGO 4.8% (930) 6.0