Fig. 3

Output from QTL analysis from the Paragon × Chinese Spring population. QTL analysis output for the Paragon × Chinese Spring population that yielded significant associations for either a CO-Phenotype or b GC-Phenotype (p < 0.05). Detailing LOD scores plotted over the respective linkage groups, i.e., chromosomes. Increased resolution of QTL peaks for c CO-Phenotype and d GC-Phenotype. e Finally, the locations of the array SNPs showing the peak associations are marked in red surrounded by a red box while also showing all other array SNP locations per chromosome