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Table 4 Average Spearman correlation of gene-level estimates from each method for the single-cell datasets against bulk data from the same cell types (four for human, three for mouse)

From: Alevin efficiently estimates accurate gene abundances from dscRNA-seq data

Dataset

Alevin

Cell Ranger

Naïve

DropEst

Human PBMC 4k

0.813

0.78

0.747

0.783

Human PBMC 8k

0.81

0.772

0.74

0.776

Mouse neurons 900

0.812

0.773

0.761

0.779

Mouse neurons 2k

0.822

0.781

0.767

0.784

Mouse neurons 9k

0.831

0.796

0.776

0.803