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Fig. 5 | Genome Biology

Fig. 5

From: Dynamics and functional interplay of histone lysine butyrylation, crotonylation, and acetylation in rice under starvation and submergence

Fig. 5

Role of Kbu, Kcr, and H3K9ac dynamics in stress-induced and diurnal gene expression. a Plots of Kbu, Kcr, and HK9ace changes of differentially expressed genes in rice under starvation and submergence. X-axis: gene expression fold change (log2); Y-axis: gene lysine acylation changes (log2); genes with acylation level (TPM) change > 1.5-fold are marked by colors. b Scatter plot showing the proportion change of H3K9ac and Kbu/Kcr in starvation/submergence DEGs. Proportion of each modification was calculated by its TPM in gene body divided by total acylation TPM value (K9ac + Kbu + Kcr) in each gene. c Enrichment of starvation and submergence upregulated genes with different combinations of the acylation marks. **Significant enrichments (p < 0.01). d Enrichment of circadian-regulated genes marked by different combinations of lysine acylations (see Additional file 1: Figure S6). **Significant enrichments (p < 0.01)

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Genome Biology

ISSN: 1474-760X

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