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Fig. 3 | Genome Biology

Fig. 3

From: Dynamics and functional interplay of histone lysine butyrylation, crotonylation, and acetylation in rice under starvation and submergence

Fig. 3

Different combinations of Kbu, Kcr, and H3K9ac modifications affect gene expression. a Venn diagram of Kbu/Kcr/H3K9ac modified genes. b Average genome-wide occupancies of H3K9ac, Kbu, and Kcr in all genes and genes with only Kbu and Kcr modifications (N = 4795). c Density curve of H3K9ac/Kbu/Kcr modification proportions in all genes. d Expression levels of genes with different modification profiles. Numbers of genes: H3K9ac (N = 418), H3K9ac + Kbu (N = 229), H3K9ac + Kcr (N = 217), H3K9ac + Kbu + Kcr (N = 20511), Kbu (N = 1234), Kcr (N = 784), Kbu + Kcr (N = 4795), all genes (N = 56384). Y-axis stands for gene expression levels calculated by log10 (FPKM + 0.001). e Expression levels of genes with different proportion of H3K9ac, Kbu, and Kcr under normal conditions. f Total acylation levels of genes with different combinations of the marks

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Genome Biology

ISSN: 1474-760X

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