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Fig. 6 | Genome Biology

Fig. 6

From: Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7

Fig. 6

Changes in distribution of the log2 fold changes of genes differentially expressed at LL36 (DEGs) in the grp7-1 8i mutant or AtGRP7-ox plants upon binding to AtGRP7. Log2 fold change distribution of all genes differentially expressed at LL36 (DEGs) from the RNA-seq data set (a AtGRP7-ox, e grp7-1 8i), as well as of iCLIP targets with a significant differential expression (b AtGRP7-ox, f grp7-1 8i), RIP targets with a significant differential expression (c AtGRP7-ox, g grp7-1 8i), and high-confidence binders identified by both iCLIP and RIP (d AtGRP7-ox, h grp7-1 8i). The distribution of all identified DEGs in RNA-seq (a, e) was tested pairwise against all target groups. The resulting p value is displayed accordingly

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Genome Biology

ISSN: 1474-760X

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