Table 2 Details of real datasets
From: Splatter: simulation of single-cell RNA sequencing data
Dataset | Species | Cell type | Platform | Protocol | UMI | Number of cells |
|---|---|---|---|---|---|---|
Camp [44] | Human | Whole brain organoids | Fluidigm C1 | SMARTer | No | 597 |
Engel [45] | Mouse | Natural killer T cells | Flow cytometry | Modified Smart-seq2 | No | 203 |
Klein [46] | Human | K562 cells | InDrop | CEL-Seq | Yes | 213 |
Tung [28] | Human | Induced pluripotent stem cells | Fluidigm C1 | Modified SMARTer | Yes | 564 |
Zeisel [47] | Mouse | Cortex and hippocampus cells | Fluidigm C1 | STRT-Seq | Yes | 3005 |