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Fig. 4 | Genome Biology

Fig. 4

From: CIDR: Ultrafast and accurate clustering through imputation for single-cell RNA-seq data

Fig. 4

Expression of cell-type markers. Four groups of cell-type markers from an independent study [21]: neurons, astrocytes, oligodendrocytes, and endothelial cells. The first 12 columns are selected samples for which the annotation agrees with the CIDR clustering. Columns 13–18 are samples that are not annotated as neurons but clustered with neurons by CIDR, prcomp, or ZIFA. Columns 19–24 are selected samples that are not annotated as neurons but clustered with neurons by t-SNE or RaceID. TPM tags per million

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