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Fig. 3 | Genome Biology

Fig. 3

From: CIDR: Ultrafast and accurate clustering through imputation for single-cell RNA-seq data

Fig. 3

Performance evaluation with the human brain scRNA-seq data set. In this data set there are 420 cells in eight cell types after the exclusion of hybrid cells. The different colors denote the cell types annotated by the study [20], while the different plotting symbols denote the clusters output by each algorithm. ae Clustering output for each of the five compared algorithms. f The adjusted rand index is used to measure the accuracy of the clustering output for each of the compared algorithms. Samples labeled by numbers are disagreements between the annotation and the clustering of the respective algorithm. PC principal coordinates

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